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https://github.com/YunoHost-Apps/jupyterlab_ynh.git
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parent
03ba0348c2
commit
5ed1002562
7 changed files with 94 additions and 108 deletions
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@ -21,7 +21,7 @@
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"nginx"
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"nginx"
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],
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],
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"arguments": {
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"arguments": {
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"install" : [
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"install": [
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{
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{
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"name": "domain",
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"name": "domain",
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"type": "domain",
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"type": "domain",
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@ -43,7 +43,7 @@
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},
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},
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{
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{
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"name": "admin",
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"name": "admin",
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"type": "user",
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"type": "user",
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"ask": {
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"ask": {
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"en": "Choose an admin user",
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"en": "Choose an admin user",
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"fr": "Choisissez l’administrateur"
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"fr": "Choisissez l’administrateur"
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@ -70,4 +70,4 @@
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}
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}
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]
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]
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}
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}
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}
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}
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@ -74,7 +74,7 @@ config_jupyter_notebook() {
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#=================================================
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#=================================================
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# CREATE A DEDICATED SYSTEMD CONFIG
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# CREATE A DEDICATED SYSTEMD CONFIG
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#=================================================
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#=================================================
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add_systemd_config () {
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add_systemd_config() {
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ynh_print_info "Adding Jupyterlab as a service..."
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ynh_print_info "Adding Jupyterlab as a service..."
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sudo cp ../conf/systemd.service.default ../conf/systemd.service
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sudo cp ../conf/systemd.service.default ../conf/systemd.service
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@ -139,41 +139,36 @@ setup_source() {
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src_format=${src_format:-tar.gz}
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src_format=${src_format:-tar.gz}
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src_format=$(echo "$src_format" | tr '[:upper:]' '[:lower:]')
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src_format=$(echo "$src_format" | tr '[:upper:]' '[:lower:]')
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src_extract=${src_extract:-true}
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src_extract=${src_extract:-true}
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if [ "$src_filename" = "" ] ; then
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if [ "$src_filename" = "" ]; then
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src_filename="${src_id}.${src_format}"
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src_filename="${src_id}.${src_format}"
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fi
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fi
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if ! test -e "$final_path"
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if ! test -e "$final_path"; then
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then
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local local_src="/opt/yunohost-apps-src/${YNH_APP_ID}/${src_filename}"
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local local_src="/opt/yunohost-apps-src/${YNH_APP_ID}/${src_filename}"
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ynh_print_info "Downloading anaconda files (used by JupyterLab)..."
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ynh_print_info "Downloading anaconda files (used by JupyterLab)..."
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if test -e "$local_src"; then # Use the local source file if it is present
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if test -e "$local_src"
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then # Use the local source file if it is present
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cp $local_src $src_filename
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cp $local_src $src_filename
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else # If not, download the source
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else # If not, download the source
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local out=`wget -nv -O $src_filename $src_url 2>&1` || ynh_print_err $out
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local out=$(wget -nv -O $src_filename $src_url 2>&1) || ynh_print_err $out
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fi
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fi
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# Check the control sum
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# Check the control sum
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echo "${src_sum} ${src_filename}" | ${src_sumprg} -c --status \
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echo "${src_sum} ${src_filename}" | ${src_sumprg} -c --status ||
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|| ynh_die "Corrupt source"
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ynh_die "Corrupt source"
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ynh_print_info "Installing anaconda (used by JupyterLab)..."
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ynh_print_info "Installing anaconda (used by JupyterLab)..."
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bash $src_filename -b -p $final_path
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bash $src_filename -b -p $final_path
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fi
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fi
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export "PATH=$final_path/bin/:$PATH"
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export "PATH=$final_path/bin/:$PATH"
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ynh_print_info "Installing JupyterLab..."
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ynh_print_info "Installing JupyterLab..."
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if [ "$src_id" = "arm" ]; then
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if [ "$src_id" = "arm" ]
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then
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conda install jupyterlab=$jupyterlab_version notebook nodejs -y
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conda install jupyterlab=$jupyterlab_version notebook nodejs -y
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pip install jupyterhub jupyterhub-ldapauthenticator
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pip install jupyterhub jupyterhub-ldapauthenticator
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else
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else
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@ -181,4 +176,4 @@ setup_source() {
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fi
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fi
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npm install -g configurable-http-proxy
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npm install -g configurable-http-proxy
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}
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}
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@ -54,14 +54,12 @@ path_url="$new_path"
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#=================================================
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#=================================================
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change_domain=0
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change_domain=0
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if [ "$old_domain" != "$new_domain" ]
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if [ "$old_domain" != "$new_domain" ]; then
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then
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change_domain=1
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change_domain=1
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fi
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fi
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change_path=0
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change_path=0
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if [ "$old_path" != "$new_path" ]
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if [ "$old_path" != "$new_path" ]; then
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then
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change_path=1
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change_path=1
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fi
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fi
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@ -78,10 +76,9 @@ yunohost service stop jupyterlab
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#=================================================
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#=================================================
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nginx_conf_path=/etc/nginx/conf.d/$old_domain.d/$app.conf
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nginx_conf_path=/etc/nginx/conf.d/$old_domain.d/$app.conf
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if [ $change_path -eq 1 ]
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if [ $change_path -eq 1 ]; then
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then
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ynh_print_info "Changing path..."
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ynh_print_info "Changing path..."
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# Make a backup of the original nginx config file if modified
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# Make a backup of the original nginx config file if modified
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ynh_backup_if_checksum_is_different "$nginx_conf_path"
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ynh_backup_if_checksum_is_different "$nginx_conf_path"
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# Set global variables for nginx helper
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# Set global variables for nginx helper
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@ -92,11 +89,10 @@ then
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fi
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fi
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# Change the domain for nginx
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# Change the domain for nginx
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if [ $change_domain -eq 1 ]
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if [ $change_domain -eq 1 ]; then
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then
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ynh_print_info "Changing domain..."
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ynh_print_info "Changing domain..."
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# Delete file checksum for the old conf file location
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# Delete file checksum for the old conf file location
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ynh_delete_file_checksum "$nginx_conf_path"
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ynh_delete_file_checksum "$nginx_conf_path"
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mv $nginx_conf_path /etc/nginx/conf.d/$new_domain.d/$app.conf
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mv $nginx_conf_path /etc/nginx/conf.d/$new_domain.d/$app.conf
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# Store file checksum for the new config file location
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# Store file checksum for the new config file location
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@ -12,81 +12,80 @@
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# | arg: -e, --length= - Length of the error log : Default : 20
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# | arg: -e, --length= - Length of the error log : Default : 20
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ynh_systemd_action() {
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ynh_systemd_action() {
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# Declare an array to define the options of this helper.
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# Declare an array to define the options of this helper.
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declare -Ar args_array=( [n]=service_name= [a]=action= [l]=line_match= [p]=log_path= [t]=timeout= [e]=length= )
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declare -Ar args_array=([n]=service_name= [a]=action= [l]=line_match= [p]=log_path= [t]=timeout= [e]=length=)
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local service_name
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local service_name
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local action
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local action
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local line_match
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local line_match
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local length
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local length
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local log_path
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local log_path
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local timeout
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local timeout
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# Manage arguments with getopts
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# Manage arguments with getopts
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ynh_handle_getopts_args "$@"
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ynh_handle_getopts_args "$@"
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local service_name="${service_name:-$app}"
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local service_name="${service_name:-$app}"
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local action=${action:-start}
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local action=${action:-start}
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local log_path="${log_path:-/var/log/$service_name/$service_name.log}"
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local log_path="${log_path:-/var/log/$service_name/$service_name.log}"
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local length=${length:-20}
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local length=${length:-20}
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local timeout=${timeout:-300}
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local timeout=${timeout:-300}
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ynh_print_info "Waiting for a response from $service_name..."
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ynh_print_info "Waiting for a response from $service_name..."
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# Start to read the log
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# Start to read the log
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if [[ -n "${line_match:-}" ]]
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if [[ -n "${line_match:-}" ]]; then
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then
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local templog="$(mktemp)"
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local templog="$(mktemp)"
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# Following the starting of the app in its log
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# Following the starting of the app in its log
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if [ "$log_path" == "systemd" ]; then
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if [ "$log_path" == "systemd" ] ; then
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# Read the systemd journal
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# Read the systemd journal
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journalctl -u $service_name -f -n0 >"$templog" &
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journalctl -u $service_name -f -n0 > "$templog" &
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else
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else
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# Read the specified log file
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# Read the specified log file
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tail -F -n0 "$log_path" >"$templog" &
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tail -F -n0 "$log_path" > "$templog" &
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fi
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# Get the PID of the tail command
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local pid_tail=$!
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fi
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fi
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# Get the PID of the tail command
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local pid_tail=$!
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fi
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echo "${action^} the service $service_name" >&2
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echo "${action^} the service $service_name" >&2
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systemctl $action $service_name \
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systemctl $action $service_name ||
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|| ( journalctl --lines=$length -u $service_name >&2 \
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(
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; test -n "$log_path" && echo "--" && tail --lines=$length "$log_path" >&2 \
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journalctl --lines=$length -u $service_name >&2 \
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; false )
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;
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test -n "$log_path" && echo "--" && tail --lines=$length "$log_path" >&2 \
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;
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false
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)
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# Start the timeout and try to find line_match
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# Start the timeout and try to find line_match
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if [[ -n "${line_match:-}" ]]
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if [[ -n "${line_match:-}" ]]; then
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then
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local i=0
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local i=0
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for i in $(seq 1 $timeout); do
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for i in $(seq 1 $timeout)
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# Read the log until the sentence is found, that means the app finished to start. Or run until the timeout
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do
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if grep --quiet "$line_match" "$templog"; then
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# Read the log until the sentence is found, that means the app finished to start. Or run until the timeout
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echo "The service $service_name has correctly started." >&2
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if grep --quiet "$line_match" "$templog"
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break
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then
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fi
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echo "The service $service_name has correctly started." >&2
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echo -n "." >&2
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break
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sleep 1
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fi
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done
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echo -n "." >&2
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if [ $i -eq $timeout ]; then
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sleep 1
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echo "The service $service_name didn't fully started before the timeout." >&2
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done
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journalctl --lines=$length -u $service_name >&2
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if [ $i -eq $timeout ]
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test -n "$log_path" && echo "--" && tail --lines=$length "$log_path" >&2
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then
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fi
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echo "The service $service_name didn't fully started before the timeout." >&2
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journalctl --lines=$length -u $service_name >&2
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test -n "$log_path" && echo "--" && tail --lines=$length "$log_path" >&2
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fi
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echo ""
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echo ""
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ynh_clean_check_starting
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ynh_clean_check_starting
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fi
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fi
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}
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}
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# Clean temporary process and file used by ynh_check_starting
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# Clean temporary process and file used by ynh_check_starting
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# (usually used in ynh_clean_setup scripts)
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# (usually used in ynh_clean_setup scripts)
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#
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#
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# usage: ynh_clean_check_starting
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# usage: ynh_clean_check_starting
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ynh_clean_check_starting () {
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ynh_clean_check_starting() {
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# Stop the execution of tail.
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# Stop the execution of tail.
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kill -s 15 $pid_tail 2>&1
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kill -s 15 $pid_tail 2>&1
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ynh_secure_remove "$templog" 2>&1
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ynh_secure_remove "$templog" 2>&1
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}
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}
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@ -42,8 +42,8 @@ ynh_webpath_register $app $domain $path_url
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#=================================================
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#=================================================
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# Check user parameter
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# Check user parameter
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ynh_user_exists "$admin" \
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ynh_user_exists "$admin" ||
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|| ynh_die "The chosen admin user does not exist."
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ynh_die "The chosen admin user does not exist."
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#=================================================
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#=================================================
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# STORE SETTINGS FROM MANIFEST
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# STORE SETTINGS FROM MANIFEST
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# If app is public, add url to SSOWat conf as skipped_uris
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# If app is public, add url to SSOWat conf as skipped_uris
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if [[ $is_public -eq 1 ]]; then
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if [[ $is_public -eq 1 ]]; then
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# unprotected_uris allows SSO credentials to be passed anyway.
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# unprotected_uris allows SSO credentials to be passed anyway.
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ynh_app_setting_set "$app" unprotected_uris "/"
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ynh_app_setting_set "$app" unprotected_uris "/"
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fi
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fi
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#=================================================
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#=================================================
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@ -37,8 +37,7 @@ ynh_remove_systemd_config
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#=================================================
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#=================================================
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# Remove a service from the admin panel, added by `yunohost service add`
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# Remove a service from the admin panel, added by `yunohost service add`
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if yunohost service status | grep -q $app
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if yunohost service status | grep -q $app; then
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then
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echo "Remove $app service"
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echo "Remove $app service"
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yunohost service remove $app
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yunohost service remove $app
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fi
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fi
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@ -66,18 +65,15 @@ ynh_secure_remove "/var/log/$app.log"
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# CLOSE PORTS
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# CLOSE PORTS
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#=================================================
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#=================================================
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if yunohost firewall list | grep -q "\- $port$"
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if yunohost firewall list | grep -q "\- $port$"; then
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then
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echo "Close port $port" >&2
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echo "Close port $port" >&2
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yunohost firewall disallow TCP $port 2>&1
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yunohost firewall disallow TCP $port 2>&1
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fi
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fi
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if yunohost firewall list | grep -q "\- $port_hub$"
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if yunohost firewall list | grep -q "\- $port_hub$"; then
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then
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echo "Close port $port_hub" >&2
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echo "Close port $port_hub" >&2
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yunohost firewall disallow TCP $port_hub 2>&1
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yunohost firewall disallow TCP $port_hub 2>&1
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fi
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fi
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if yunohost firewall list | grep -q "\- $port_http_proxy$"
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if yunohost firewall list | grep -q "\- $port_http_proxy$"; then
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then
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echo "Close port $port_http_proxy" >&2
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echo "Close port $port_http_proxy" >&2
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yunohost firewall disallow TCP $port_http_proxy 2>&1
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yunohost firewall disallow TCP $port_http_proxy 2>&1
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fi
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fi
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@ -92,4 +88,4 @@ ynh_remove_nginx_config
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# REMOVE LOGROTATE CONFIGURATION
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# REMOVE LOGROTATE CONFIGURATION
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#=================================================
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#=================================================
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#ynh_remove_logrotate
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#ynh_remove_logrotate
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@ -104,8 +104,8 @@ add_systemd_config
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# If app is public, add url to SSOWat conf as skipped_uris
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# If app is public, add url to SSOWat conf as skipped_uris
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if [[ $is_public -eq 1 ]]; then
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if [[ $is_public -eq 1 ]]; then
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# See install script
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# See install script
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ynh_app_setting_set "$app" unprotected_uris "/"
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ynh_app_setting_set "$app" unprotected_uris "/"
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fi
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fi
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#=================================================
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#=================================================
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@ -124,4 +124,4 @@ yunohost service add $app --log "systemd"
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# START SERVICE
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# START SERVICE
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#=================================================
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#=================================================
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ynh_systemd_action -n $app -a restart -l "JupyterHub is now running at" -p "systemd"
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ynh_systemd_action -n $app -a restart -l "JupyterHub is now running at" -p "systemd"
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